java desktop software version 4.03 of gene set enrichment analysis Search Results


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Broad Institute Inc java desktop software version 4.03 of gsea
Characteristics of CD24‐high DLBCL. (A) Bar plot indicating that the numbers of CD24‐high and CD24‐low cases were comparable in GCB and ABC DLBCL. UNC, unclassified. (B–D) CD24‐high cases were enriched in MYC rearrangement cases (B), single‐ or double‐hit cases (C), and MHG cases (D). NA, not assessed. (E) Bar plot of the <t>GSEA.</t> NES, normalized enrichment score. (F) The most enriched gene set of the CD24‐high group was ‘hallmark_MYC_targets’. (G, H) The top two enriched gene sets in the CD24‐low group were related inflammatory genes, such as ‘Hallmark_inflammatory_response’ and ‘Hallmark_TNFa_signaling_via_NFkB’.
Java Desktop Software Version 4.03 Of Gsea, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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RStudio r statistical software r version 4.0.3
Characteristics of CD24‐high DLBCL. (A) Bar plot indicating that the numbers of CD24‐high and CD24‐low cases were comparable in GCB and ABC DLBCL. UNC, unclassified. (B–D) CD24‐high cases were enriched in MYC rearrangement cases (B), single‐ or double‐hit cases (C), and MHG cases (D). NA, not assessed. (E) Bar plot of the <t>GSEA.</t> NES, normalized enrichment score. (F) The most enriched gene set of the CD24‐high group was ‘hallmark_MYC_targets’. (G, H) The top two enriched gene sets in the CD24‐low group were related inflammatory genes, such as ‘Hallmark_inflammatory_response’ and ‘Hallmark_TNFa_signaling_via_NFkB’.
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SAS institute jmps v.4.0.3
Characteristics of CD24‐high DLBCL. (A) Bar plot indicating that the numbers of CD24‐high and CD24‐low cases were comparable in GCB and ABC DLBCL. UNC, unclassified. (B–D) CD24‐high cases were enriched in MYC rearrangement cases (B), single‐ or double‐hit cases (C), and MHG cases (D). NA, not assessed. (E) Bar plot of the <t>GSEA.</t> NES, normalized enrichment score. (F) The most enriched gene set of the CD24‐high group was ‘hallmark_MYC_targets’. (G, H) The top two enriched gene sets in the CD24‐low group were related inflammatory genes, such as ‘Hallmark_inflammatory_response’ and ‘Hallmark_TNFa_signaling_via_NFkB’.
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Siemens AG linear accelerator siemens artiste
Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear <t>accelerator</t> in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)
Linear Accelerator Siemens Artiste, supplied by Siemens AG, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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RStudio heatmaply package for
Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear <t>accelerator</t> in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)
Heatmaply Package For, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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NETZSCH qms 403 c aelos mass detector
Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear <t>accelerator</t> in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)
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RStudio computing and programming language r v. 4.0.3
Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear <t>accelerator</t> in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)
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RStudio v.4.0.3
Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear <t>accelerator</t> in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)
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IONICON Inc methanol ch5o
Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear <t>accelerator</t> in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)
Methanol Ch5o, supplied by IONICON Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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COMSOL Inc comsol multiphysics
Scaffold design and its properties.
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Image Search Results


Characteristics of CD24‐high DLBCL. (A) Bar plot indicating that the numbers of CD24‐high and CD24‐low cases were comparable in GCB and ABC DLBCL. UNC, unclassified. (B–D) CD24‐high cases were enriched in MYC rearrangement cases (B), single‐ or double‐hit cases (C), and MHG cases (D). NA, not assessed. (E) Bar plot of the GSEA. NES, normalized enrichment score. (F) The most enriched gene set of the CD24‐high group was ‘hallmark_MYC_targets’. (G, H) The top two enriched gene sets in the CD24‐low group were related inflammatory genes, such as ‘Hallmark_inflammatory_response’ and ‘Hallmark_TNFa_signaling_via_NFkB’.

Journal: The Journal of Pathology: Clinical Research

Article Title: CD24 is a surrogate for ‘immune‐cold’ phenotype in aggressive large B‐cell lymphoma

doi: 10.1002/cjp2.266

Figure Lengend Snippet: Characteristics of CD24‐high DLBCL. (A) Bar plot indicating that the numbers of CD24‐high and CD24‐low cases were comparable in GCB and ABC DLBCL. UNC, unclassified. (B–D) CD24‐high cases were enriched in MYC rearrangement cases (B), single‐ or double‐hit cases (C), and MHG cases (D). NA, not assessed. (E) Bar plot of the GSEA. NES, normalized enrichment score. (F) The most enriched gene set of the CD24‐high group was ‘hallmark_MYC_targets’. (G, H) The top two enriched gene sets in the CD24‐low group were related inflammatory genes, such as ‘Hallmark_inflammatory_response’ and ‘Hallmark_TNFa_signaling_via_NFkB’.

Article Snippet: The Broad Institute JAVA Desktop software Version 4.03 of GSEA was utilized.

Techniques:

Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear accelerator in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)

Journal: Journal of Applied Clinical Medical Physics

Article Title: Corrections of photon beam profiles of small fields measured with ionization chambers using a three‐layer neural network

doi: 10.1002/acm2.13447

Figure Lengend Snippet: Deconvolution results with the pre‐trained NN using the Siemens Artiste training dataset for the SNC 125c for selected fields at 10 cm depth. The test dataset was acquired at an Elekta Synergy linear accelerator in a Sun Nuclear 3D Scanner water phantom. The bottom plot shows the result of the gamma analysis (0.5 mm/0.5%; TH 5%) comparing the deconvolved profile with the reference profile. The shaded regions indicate the part of the profiles, where the intensity is below the 5% threshold (TH)

Article Snippet: Lateral beam profiles of photon fields between 0.56 × 0.56 cm 2 and 4.03 × 4.03 cm 2 were collected on a Siemens Artiste linear accelerator.

Techniques:

Scaffold design and its properties.

Journal: Polymers

Article Title: Application of Computational Method in Designing a Unit Cell of Bone Tissue Engineering Scaffold: A Review

doi: 10.3390/polym13101584

Figure Lengend Snippet: Scaffold design and its properties.

Article Snippet: Non-Parametric Design , , Circular , Poly(L-lactic-co-glycolic acid) (PLGA), type I collagen, and nano-hydroxyapatite (nHA) , 54.3–65.2 , 4.03–5.67 , - , - , COMSOL Multiphysics , [ ] .

Techniques: Software